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This queue is for tickets about the Bio-LITE-Taxonomy-NCBI-Gi2taxid CPAN distribution.

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The Basics
Id: 91588
Status: resolved
Priority: 0/
Queue: Bio-LITE-Taxonomy-NCBI-Gi2taxid
People
Owner: Nobody in particular
Requestors: dana.price [...] gmail.com
Cc:
AdminCc:
Bug Information
Severity: (no value)
Broken in: (no value)
Fixed in: (no value)

History Show all quoted text
  Sun Dec 22 19:53:39 2013 dana.price [...] gmail.com - Ticket created
Subject: re: substr outside of string in new_dict
Date: Sun, 22 Dec 2013 19:53:30 -0500
To: bug-bio-lite-taxonomy-ncbi-gi2taxid [...] rt.cpan.org
From: Dana Price <dana.price [...] gmail.com>
As an addendum, I've debugged a bit and notice that it dies on line # 93,303,697 of my gi_taxid_prot.dmp file, which matches 536870913 1151232 If I do a head -93303695 gi_taxid_prot.dmp and run the script on the output, it completes fine..
  Mon Dec 23 06:32:14 2013 MOTIF [...] cpan.org - Correspondence added
El Dom Dic 22 19:53:39 2013, dana.price@gmail.com escribió: Show quoted text
> As an addendum, I've debugged a bit and notice that it dies on line # > 93,303,697 of my gi_taxid_prot.dmp file, which matches > > 536870913 1151232 > > If I do a > > head -93303695 gi_taxid_prot.dmp > > and run the script on the output, it completes fine..
  Mon Dec 23 06:32:15 2013 The RT System itself - Status changed from 'new' to 'open'
  Mon Dec 23 06:32:15 2013 MOTIF [...] cpan.org - Status changed from 'open' to 'resolved'