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This queue is for tickets about the bioperl CPAN distribution.

Report information
The Basics
Id: 82928
Status: resolved
Priority: 0/
Queue: bioperl

People
Owner: Nobody in particular
Requestors: CHORNY [...] cpan.org
Cc:
AdminCc:

Bug Information
Severity: Important
Broken in: 1.6.901
Fixed in: (no value)



Subject: SeqIO.t fails
Debian, perl 5.16.2. Possibly because locale is Russian. Should I try to write a patch? # Failed test 'Must pass a real file' # at t/SeqIO/SeqIO.t line 135. # expecting: Regexp ((?^:Can not open 'foo.bar' for reading: No such file or directory)) # found: Bio::Root::Exception ( # ------------- EXCEPTION: Bio::Root::Exception ------------- # MSG: Can not open 'foo.bar' for reading: Нет такого файла или каталога # STACK: Error::throw # STACK: Bio::Root::Root::throw Bio/Root/Root.pm:472 # STACK: Bio::Tools::GuessSeqFormat::guess Bio/Tools/GuessSeqFormat.pm:462 # STACK: Bio::SeqIO::new Bio/SeqIO.pm:381 # STACK: Test::Exception::throws_ok t/SeqIO/SeqIO.t:134 # STACK: t/SeqIO/SeqIO.t:135 # ----------------------------------------------------------- # ) # Looks like you failed 1 test of 45. t/SeqIO/SeqIO.t .............................. Dubious, test returned 1 (wstat 256, 0x100) Failed 1/45 subtests -- Alexandr Ciornii, http://chorny.net