Skip Menu |

This queue is for tickets about the bioperl CPAN distribution.

Report information
The Basics
Id: 36117
Status: rejected
Priority: 0/
Queue: bioperl
People
Owner: Nobody in particular
Requestors: stro [...] cpan.org
Cc:
AdminCc:
Bug Information
Severity: Critical
Broken in: 1.5.2_102
Fixed in: (no value)

History Show all quoted text
  Thu May 22 20:23:58 2008 stro [...] cpan.org - Ticket created
Subject: Circular dependency
bioperl-1.5.2_102 depends on Bio::ASN1::EntrezGene Bio-ASN1-EntrezGene-1.091 depends on Bio::Index::AbstractSeq Bio::Index::AbstractSeq is a part of bioperl So we have a circular dependency. -- Serguei Trouchelle
  Tue May 27 11:00:58 2008 sb10 [...] sanger.ac.uk - Correspondence added
From: bix [...] sendu.me.uk
On Thu May 22 20:23:58 2008, STRO wrote: Show quoted text
> bioperl-1.5.2_102 depends on Bio::ASN1::EntrezGene > Bio-ASN1-EntrezGene-1.091 depends on Bio::Index::AbstractSeq > Bio::Index::AbstractSeq is a part of bioperl > > So we have a circular dependency.
Yes. However, it isn't a strict dependency of BioPerl, but an optional installation. So chose not to install it.
  Tue May 27 11:01:21 2008 The RT System itself - Status changed from 'new' to 'open'
  Tue May 27 11:04:04 2008 sb10 [...] sanger.ac.uk - Status changed from 'open' to 'rejected'