Subject: | Bunde::BioPerl bug report |
Date: | Fri, 17 Nov 2006 09:54:16 +0100 |
To: | bug-Bundle-BioPerl [...] rt.cpan.org, dag [...] sonsorol.org |
From: | Victor de Jager <victor.de.jager [...] nbic.nl> |
Hi Christian,
I am trying to install BioPerl on one of our research machines using
CPAN, but it breaks on a spelling error.
Bundle summary: The following items in bundle Bundle::BioPerl had
installation problems:
Data::Stag::writer HTTP::Request::Common- Spreadhseet::ParseExcel
This should be Spreadsheet::ParseExcel of course.
Data::Stag::writer does not exist in CPAN, should be Data::Stag::Writer
Hope it helps, meanwhile I got around using the CVS version.
Best regards
Victor de Jager
1) Bioinformatics Support (NBIC)
2) CMBI Bacterial Genomics
Phone: +31 (0)24 36 19504
E-mail: victor.de.jager@nbic.nl
Netherlands Bioinformatics Centre
260 NBIC
P.O. Box 9101
6500 HB Nijmegen
Fax: +31 (0)24 36 19395
Visiting address:
Geert Grooteplein 28, Route 260
6525 GA Nijmegen
*Here's the complete output of my try:
perl -MCPAN -e 'install Bundle::BioPerl'
CPAN: Storable loaded ok
Going to read /root/.cpan/Metadata
Database was generated on Fri, 17 Nov 2006 06:24:14 GMT
Ace is up to date.
Bio::ASN1::EntrezGene is up to date.
Class::AutoClass is up to date.
Clone is up to date.
Convert::Binary::C is up to date.
Running install for module Data::Stag::writer
The module Data::Stag::writer isn't available on CPAN.
Either the module has not yet been uploaded to CPAN, or it is
temporary unavailable. Please contact the author to find out
more about the status. Try 'i Data::Stag::writer'.
DBD::mysql is up to date.
GD::SVG is up to date.
GD is up to date.
Graph::Directed is up to date.
HTML::Parser is up to date.
Running install for module HTTP::Request::Common-
The module HTTP::Request::Common- isn't available on CPAN.
Either the module has not yet been uploaded to CPAN, or it is
temporary unavailable. Please contact the author to find out
more about the status. Try 'i HTTP::Request::Common-'.
LWP::UserAgent is up to date.
Set::Scalar is up to date.
SOAP::Lite is up to date.
Running install for module Spreadhseet::ParseExcel
The module Spreadhseet::ParseExcel isn't available on CPAN.
Either the module has not yet been uploaded to CPAN, or it is
temporary unavailable. Please contact the author to find out
more about the status. Try 'i Spreadhseet::ParseExcel'.
Storable is up to date.
SVG is up to date.
SVG::Graph is up to date.
Text::Shellwords is up to date.
XML::DOM::XPath is up to date.
XML::Parser::PerlSAX is up to date.
XML::SAX is up to date.
XML::SAX::Base is up to date.
XML::SAX::Writer is up to date.
XML::Simple is up to date.
XML::Twig is up to date.
XML::Writer is up to date.
Bundle summary: The following items in bundle Bundle::BioPerl had
installation problems:
Data::Stag::writer HTTP::Request::Common- Spreadhseet::ParseExcel
*