| Subject: | Pod and pod coverage tests fail |
See subject. Excerpt of test output:
...
# Failed test 'Pod coverage on CracTools::DigitagCT::Structure'
# at /opt/perl-5.28.2/lib/site_perl/5.28.2/Test/Pod/Coverage.pm line 133.
# Coverage for CracTools::DigitagCT::Structure is 14.3%, with 6 naked subroutines:
# addGenericElement
# addTag
# getGenericElement
# getSAMLine
# nbOccurences
# new
# Failed test 'Pod coverage on CracTools::DigitagCT::Analyzer'
# at /opt/perl-5.28.2/lib/site_perl/5.28.2/Test/Pod/Coverage.pm line 133.
# CracTools::DigitagCT::Analyzer: couldn't find pod
# Failed test 'Pod coverage on CracTools::DigitagCT::Analyzer::SAGE'
# at /opt/perl-5.28.2/lib/site_perl/5.28.2/Test/Pod/Coverage.pm line 133.
# Coverage for CracTools::DigitagCT::Analyzer::SAGE is 33.3%, with 2 naked subroutines:
# getHeaders
# getOutput
# Failed test 'Pod coverage on CracTools::DigitagCT::Analyzer::RNASeq'
# at /opt/perl-5.28.2/lib/site_perl/5.28.2/Test/Pod/Coverage.pm line 133.
# Coverage for CracTools::DigitagCT::Analyzer::RNASeq is 20.0%, with 4 naked subroutines:
# bsearchRNA
# getHeaders
# getOutput
# name
Smartmatch is experimental at /home/cpansand/.cpan/build/2020030810/digitagCT-1.01-3/blib/lib/CracTools/DigitagCT/Analyzer/Annotation.pm line 200.
# Failed test 'Pod coverage on CracTools::DigitagCT::Analyzer::Annotation'
# at /opt/perl-5.28.2/lib/site_perl/5.28.2/Test/Pod/Coverage.pm line 133.
# Coverage for CracTools::DigitagCT::Analyzer::Annotation is 37.5%, with 5 naked subroutines:
# getAnnotationSummary
# getHeaders
# getOutput
# priorityNeighborhoodLeft
# priorityNeighborhoodRight
# Failed test 'Pod coverage on CracTools::DigitagCT::Analyzer::Tiling'
# at /opt/perl-5.28.2/lib/site_perl/5.28.2/Test/Pod/Coverage.pm line 133.
# Coverage for CracTools::DigitagCT::Analyzer::Tiling is 25.0%, with 3 naked subroutines:
# bsearchTAR
# getHeaders
# getOutput
# Looks like you failed 6 tests of 8.
t/pod-coverage.t .....................
Dubious, test returned 6 (wstat 1536, 0x600)
Failed 6/8 subtests
# Failed test 'POD test for blib/lib/CracTools/DigitagCT.pm'
# at /opt/perl-5.28.2/lib/site_perl/5.28.2/Test/Pod.pm line 184.
# blib/lib/CracTools/DigitagCT.pm (101): Non-ASCII character seen before =encoding in 'Jer�me'. Assuming UTF-8
# Looks like you failed 1 test of 9.
t/pod.t ..............................
Dubious, test returned 1 (wstat 256, 0x100)
Failed 1/9 subtests
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