Subject: | Attribute (scanWindowList) does not pass the type constraint because: Validation |
Date: | Fri, 12 Dec 2014 10:06:46 +0100 |
To: | <bug-MzML-Parser [...] rt.cpan.org> |
From: | "Patrick Guterl" <Patrick.Guterl [...] unistra.fr> |
Hi,
I have a error with my sample.mzML
The program:
#!/usr/bin/perl
use strict;
use warnings;
use MzML::Parser;
my $p = MzML::Parser->new();
my $res = $p->parse("sample.mzML");
A error is generated:
Attribute (scanWindowList) does not pass the type constraint because: Validation failed
for 'MzML::ScanWindowList' with value undef at accessor MzML::Scan::scanWindowList
(defined at /usr/local/share/perl5/MzML/Scan.pm line 39) line 4
MzML::Scan::scanWindowList('MzML::Scan=HASH(0x3d967a0)', undef) called at
/usr/local/share/perl5/MzML/Parser.pm line 918
MzML::Parser::parse_run('XML::Twig=HASH(0x34f9d80)',
'XML::Twig::Elt=HASH(0x3022f98)') called at /usr/local/share/perl5/XML/Twig.pm line 2332
XML::Twig::_twig_end('XML::Parser::Expat=HASH(0x34fa980)', 'run') called at
/usr/local/lib64/perl5/XML/Parser/Expat.pm line 470
XML::Parser::Expat::parse('XML::Parser::Expat=HASH(0x34fa980)',
'*XML::Parser::FILE') called at /usr/local/lib64/perl5/XML/Parser.pm line 187
eval {...} at /usr/local/lib64/perl5/XML/Parser.pm line 186
XML::Parser::parse('XML::Twig=HASH(0x34f9d80)', '*XML::Parser::FILE') called at
/usr/local/share/perl5/XML/Twig.pm line 761
eval {...} at /usr/local/share/perl5/XML/Twig.pm line 761
XML::Twig::parse('XML::Twig=HASH(0x34f9d80)', '*XML::Parser::FILE') called at
/usr/local/lib64/perl5/XML/Parser.pm line 233
eval {...} at /usr/local/lib64/perl5/XML/Parser.pm line 232
XML::Parser::parsefile('XML::Twig=HASH(0x34f9d80)', 'sample.mzML') called at
/usr/local/share/perl5/XML/Twig.pm line 774
eval {...} at /usr/local/share/perl5/XML/Twig.pm line 774
XML::Twig::parsefile('XML::Twig=HASH(0x34f9d80)', 'sample.mzML') called at
/usr/local/share/perl5/MzML/Parser.pm line 80
MzML::Parser::parse('MzML::Parser=HASH(0x34772e0)', 'sample.mzML') called at
parserML.pl line 10
The file t/sample.mzML work fine.
My sample.mzML is attached
Bien cordialement,
Patrick GUTERL
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Patrick GUTERL
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E-mail: Patrick.Guterl@unistra.fr
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